Schiffer, Jamie M.: search on Z-Library

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1

Conformational communication mediates the reset step in t6A biosynthesis

Luthra, Amit, Paranagama, Naduni, Swinehart, William, Bayooz, Susan, Phan, Phuc, Quach, Vanessa, Schiffer, Jamie M, Stec, Boguslaw, Iwata-Reuyl, Dirk, Swairjo, Manal A

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 15.20 MB

english, 2019

2

Seeing the Unseen: Sampling the Excited State of T4 Lysozyme L99A with Simulations on the Anton Supercomputer

Schiffer, Jamie, Sida, Roxana, Arciniega, Dariana, Malmstrom, Robert, Feher, Victoria, Amaro, Rommie

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 51 KB

english, 2016

3

Water networks and correlated motions in mutant IDH1 are critical for allosteric inhibitor binding and activity

Chambers, Jennifer, Miller, Wade, Quichocho, Giovanni, Upadhye, Viraj, Matteo, Diego Avellaneda, Bobkov, Andrey, Sohl, Christal, Schiffer, Jamie M.

Journal:

Year:

2019

Language:

english

File:

PDF, 1.74 MB

english, 2019

4

Impacts of Lipase Enzyme on the Surface Properties of Marine Aerosols

Schiffer, Jamie M., Luo, Man, Dommer, Abigail C., Thoron, Gray, Pendergraft, Matthew A., Santander, Mitchell V., Lucero, Dolan, Pecora de Barros, Emilia, Prather, Kimberly Ann, Grassian, Vicki H., Ama

Journal:

The Journal of Physical Chemistry Letters

Year:

2018

Language:

english

File:

PDF, 874 KB

english, 2018

5

Sea Spray Aerosol: Where Marine Biology Meets Atmospheric Chemistry

Schiffer, Jamie M., Mael, Liora E., Prather, Kimberly A., Amaro, Rommie E., Grassian, Vicki H.

Journal:

ACS Central Science

Year:

2018

Language:

english

File:

PDF, 4.40 MB

english, 2018

6

Assessing the Potential Effects of Active Site Mg 2+ Ions in the glmS Ribozyme–Cofactor Complex

Zhang, Sixue, Stevens, David R., Goyal, Puja, Bingaman, Jamie L., Bevilacqua, Philip C., Hammes-Schiffer, Sharon

Journal:

The Journal of Physical Chemistry Letters

Year:

2016

Language:

english

File:

PDF, 1.20 MB

english, 2016

7

Capturing Invisible Motions in the Transition from Ground to Rare Excited States of T4 Lysozyme L99A

Schiffer, Jamie M., Feher, Victoria A., Malmstrom, Robert D., Sida, Roxana, Amaro, Rommie E.

Journal:

Biophysical Journal

Year:

2016

Language:

english

File:

PDF, 2.78 MB

english, 2016

8

Protein co-factors are essential for high affinity DNA binding by the nuclear factor κB RelA subunit

Mulero, Maria Carmen, Shahabi, Shandy, Ko, Myung Soo, Schiffer, Jamie M, Huang, Debin, Wang, Vivien Ya-Fan, Amaro, Rommie E., Huxford, Tom, Ghosh, Gourisankar

Journal:

Year:

2018

Language:

english

File:

PDF, 3.32 MB

english, 2018

9

Model of the Ankyrin and SOCS Box Protein, ASB9, E3 Ligase Reveals a Mechanism for Dynamic Ubiquitin Transfer

Schiffer, Jamie M., Malmstrom, Robert D., Parnell, Jonathan, Ramirez-Sarmiento, Cesar, Reyes, Javiera, Amaro, Rommie E., Komives, Elizabeth A.

Journal:

Year:

2016

Language:

english

File:

PDF, 3.73 MB

english, 2016

10

How the Ankyrin and SOCS Box Protein, ASB9, Binds to Creatine Kinase

Balasubramaniam, Deepa, Schiffer, Jamie, Parnell, Jonathan, Mir, Stephan P., Amaro, Rommie E., Komives, Elizabeth A.

Journal:

Year:

2015

Language:

english

File:

PDF, 2.11 MB

english, 2015

11

Inhibitor potency varies widely among tumor-relevant human isocitrate dehydrogenase 1 mutants

Matteo, Diego Avellaneda, Wells, Grace A., Luna, Lucas A., Grunseth, Adam J., Zagnitko, Olga, Scott, David A., Hoang, An, Luthra, Amit, Swairjo, Manal A., Schiffer, Jamie M., Sohl, Christal D.

Journal:

Biochemical Journal

Year:

2018

Language:

english

File:

PDF, 2.33 MB

english, 2018

12

Surfactant Charge Modulates Structure and Stability of Lipase-Embedded Monolayers at Marine-Relevant Aerosol Surfaces

Luo, Man, Dommer, Abigail C., Schiffer, Jamie M., Rez, Donald J., Mitchell, Andrew R., Amaro, Rommie E., Grassian, Vicki H.

Journal:

Year:

2019

Language:

english

File:

PDF, 2.87 MB

english, 2019

13

The Structural and Kinetic Ensemble of ASB9's N-Terminus and It's Role in Substrate Recognition

Schiffer, Jamie, Balasubramaniam, Deepa, Parnell, Jonathan

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 122 KB

english, 2014

14

Water networks and correlated motions in mutant IDH1 are critical for allosteric inhibitor binding and activity

Chambers, Jennifer, Miller, Wade, Quichocho, Giovanni, Upadhye, Viraj, Matteo, Diego Avellaneda, Bobkov, Andrey, Sohl, Christal, Schiffer, Jamie M.

Journal:

Year:

2019

File:

PDF, 1.74 MB

2019

15

Community-Dwelling Adults at Nutrition Risk: Characteristics in Relation to the Consumption of Oral Nutritional Supplements

Sulo, Suela, Schiffer, Linda, Sheean, Patricia, Farrar, Isabel, Partridge, Jamie, Fitzgibbon, Marian

Journal:

Journal of Primary Care & Community Health

Year:

2020

File:

PDF, 117 KB

2020

16

Regulation of Creatine Kinase by ASB9

Balasubramaniam, Deepa, Schiffer, Jamie, Komives, Elizabeth

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 44 KB

english, 2014

17

Role of the Active Site Guanine in the glmS Ribozyme Self-Cleavage Mechanism: Quantum Mechanical/Molecular Mechanical Free Energy Simulations

Zhang, Sixue, Ganguly, Abir, Goyal, Puja, Bingaman, Jamie L., Bevilacqua, Philip C., Hammes-Schiffer, Sharon

Journal:

Journal of the American Chemical Society

Year:

2015

Language:

english

File:

PDF, 3.41 MB

english, 2015

18

Construing the Dynamic Complexity at a Plausible IKK2-Nemo Interface

Schiffer, Jamie M., Tien Nguyen, Thuy, Demir, Ozlem, Chan, Garret, Amaro, Rommie E., Ghosh, Gourisankar

Journal:

Biophysical Journal

Year:

2017

Language:

english

File:

PDF, 43 KB

english, 2017

19

How Lymphoma Mutation Disrupts Functional Conformation of IKK2 Under the Lens of Computational Microscope

Nguyen, Thuy Tien T., Schiffer, Jamie, Ghosh, Gourisankar, Amaro, Rommie

Journal:

Biophysical Journal

Year:

2018

File:

PDF, 43 KB

2018

20

The GlcN6P cofactor plays multiple catalytic roles in the glmS ribozyme

Bingaman, Jamie L, Zhang, Sixue, Stevens, David R, Yennawar, Neela H, Hammes-Schiffer, Sharon, Bevilacqua, Philip C

Journal:

Nature Chemical Biology

Year:

2017

Language:

english

File:

PDF, 1.55 MB

english, 2017

21

Atomic-Level Insights into the Dynamics of Enzymes and Intrinsically Disordered Proteins within Sea Spray Aerosol Particles

Schiffer, Jamie, Amaro, Rommie

Journal:

Biophysical Journal

Year:

2018

File:

PDF, 43 KB

2018

22

Improving the Efficiency of Ligand-Binding Protein Design with Molecular Dynamics

Pecora de Barros, Emilia, Schiffer, Jamie M., Vorobieva, Anastassia, Dou, Jiayi, Baker, David, Amaro, Rommie E.

Journal:

Journal of Chemical Theory and Computation

Year:

2019

Language:

english

File:

PDF, 842 KB

english, 2019

23

Nutrition risk among an ethnically diverse sample of community-dwelling older adults

Sheean, Patricia, Farrar, Isabel C, Sulo, Suela, Partridge, Jamie, Schiffer, Linda, Fitzgibbon, Marian

Journal:

Public Health Nutrition

Year:

2018

Language:

english

File:

PDF, 543 KB

english, 2018

24

Mechanisms for Benzene Dissociation through the Excited State of T4 Lysozyme L99A Mutant

Feher, Victoria A., Schiffer, Jamie M., Mermelstein, Daniel J., Mih, Nathan, Pierce, Levi C.T., McCammon, J. Andrew, Amaro, Rommie E.

Journal:

Biophysical Journal

Year:

2018

Language:

english

File:

PDF, 1.91 MB

english, 2018

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